Some schools have applied economics programs. Some master's programs are applied programs or have specialties in areas like . This page has links to these programs. You can find general information about programs in economics at PhD programs or Master's programs.
Illinois
State University -- Electricity, Natural Gas, and Telecommunications
Economics, Applied Community and Economic Development
Marquette --Business Economics, Financial Economics, International Economics
University of Cincinnati -- Business Economics, Economic Data Analysis
University of Minnesota -- The Department of Applied Economics is Separate from the Department of Economics and offers courses in Agricultural Economics, Consumer Economics, Financial Economics and so on.
UC Santa Cruz -- Applied Finance and Economics